Alignment of MT-CO1 using MUSCLE 3.7

>Plasmodium_falciparum]
RLTWMDNTRLFQSITAVAGTVWIKYFSFISEPHVIFIVLNRYSLITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTELY
SSSLRIIAQENVNLYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAE
FGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSGMLLLT
LPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNYCRN-LFGNQSMILAMG
CIAVLGSLVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFGGTTGVI
LGNAAIDVALHDTYYVIAHFHFVLSIGAIIGLFTTVSAFQDNFFGKNLRENSIVILWSMLFFVGVILTFLPMHFLGFNVM
PRRIPDYPDALNGWNMICSIGSTMTLFGLLIFK-----------------------------------------------
----------------------------------

>Schizosaccharomyces_pombe]
----MNSWWTYVNR-------WI----------------------FSTNAKDIAILYLLFGLVSGIIGSVFSFIIRMELS
APG-SQFLSGNGQLYNVAISAHGILMIFFFIIPALFGAFGNYLVPLMIGAPDVAYPRVNNFTFWLLPPALMLLLISALTE
EGPGGGWTVYPPLSSIT-SHSGPAIDLAILSLQLTGISSTLGSVNLIATMINMRAPGLSLYQMPLFAWAIMITSILLLLT
LPVLAGGLFMLFSDRNLNTSFYAPEGGGDPVLYQHLFWFFGHPEVYILIMPAFGVVSHIIPSLA-HKPIFGKEGMLWAML
SIALLGLMVWSHHLFTVGLDVDTRAYFSAATMVIAIPTGIKIFSWLATLTGGAIQWSRVPMLYAIGFLILFTIGGLTGVI
LSNSVLDIAFHDTYFVVAHFHYVLSMGALFGLCGAY-YWSPKMFGLMYNETLASIQFWILFI-GVNIVFGPQHFLGLNGM
PRRIPDYPEAFVGWNFVSSIGSVISILSLFLFMYVMYDQFTSN-------RVVKTNPYLIPSYFDDNVIFVNEK------
LGVAQSIEWLLHSPVHEHAFNTLPTKSI------

>Caenorhabditis_elegans]
--------MNLYKKYQGGLAVWL----------------------ESSNHKDIGTLYFIFGLWSGMVGTSFSLLIRLELA
KPG-FFL--SNGQLYNSVITAHAILMIFFMVMPTMIGGFGNWLLPLMLGAPDMSFPRLNNLSFWLLPTSMLLILDACFVD
MGCGTSWTVYPPLST-M-GHPGSSVDLAIFSLHAAGLSSILGGINFMCTTKNLRSSSISLEHMTLFVWTVFVTVFLLVLS
LPVLAGAITMLLTDRNLNTSFFDPSTGGNPLIYQHLFWFFGHPEVYILILPAFGIVSQSTLYLTGKKEVFGALGMVYAIL
SIGLIGCVVWAHHMYTVGMDLDSRAYFSAATMVIAVPTGVKVFSWLATLFGMKMVFN-PLLLWVLGFIFLFTLGGLTGVV
LSNSSLDIILHDTYYVVSHFHYVLSLGAVFGIFTGVTLWWSFITGYVLDKLMMSAVFILLFI-GVNLTFFPLHFAGLHGF
PRKYLDYPDVYSVWNIIASYGSIISTAGLFLFIYVLLESFFSY-------R---------L------VISDYYS------
---NSSPEYCMSNYVFGHSYQSEIYFSTTSLKN-

>Ashbya_gossypii_ATCC_10895]
---------MYLQR-------WL----------------------FSTNAKDIAILYFIFSTFCGLAGTAMSFIIRMELS
APG-QQYLQGQNQLFNVLVTGHTILMVFFLVMPMLIGGFGNYYLPLMIGASDMSFARLNNISFWTLPPTLICLLTSTMVE
SGTGTGWTVYPPLSSIQ-SHSGASVDLAIFSLHLTTISSLLGTINFIVTALNMRTNGMTLHKMPLFTWSILITAVMLLMS
LPVLSAGVTMLLMDRNFNTSFFEVQGGGDPILYQHLFWFFGHPEVYIMIVPTFGMMSHIVSTYS-KKPVFGEISMIYTMG
SISLLGFLVWSHHMYVVGLDTDTRAYFTSATMIITIPTSIKVFSWLTTIYGGSLRLT-TPMLYTLSFLFLFTVGGLTGVV
LANTSLDVAFHDTYYVVTHFHYVLSLGAVFSMFAGYYYWSPTVLGLNYNEKLSQIQFWLIFL-GTNIIFFPMHFLGINGM
PRRIPDYPDTFTGWNLVSSFGSMMTIMSLMLFTYIIYDQLMNGLTNKVNNK---------SINYMKTPDFIESNNIFLMN
TTKSSSIEFMLNSPPTIHSFNTPTIQS-------

>Saccharomyces_cerevisiae]
----------MVQR-------WL----------------------YSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELA
APG-SQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVE
SGAGTGWTVYPPLSSIQ-AHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLS
LPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVSTYS-KKPVFGEISMVYAMA
SIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIHGGSIRLA-TPMLYAIAFLFLFTMGGLTGVA
LANASLDVAFHDTYYVVGHFHYVLSMGAIFSLFAGYYYWSPQILGLNYNEKLAQIQFWLIFI-GANVIFFPMHFLGINGM
PRRIPDYPDAFAGWNYVASIGSFIATLSLFLFIYILYDQLVNGLNNKVNNK---------SVIYNKAPDFVESNTIFNLN
TVKSSSIEFLLTSPPAVHSFNTPAVQS-------

>Kluyveromyces_lactis]
----------MIER-------WL----------------------YSTNAKDIAVLYFIFAIFCGMAGTAMSLIIRLELA
APG-NQVLSGNHQLFNVLVVGHAVLIIFFLVMPALIGGFGNYMLPLLIGASDMSFARLNNISFWCLPPALVCLVTSTLVE
SGAGTGWTVYPPLSSIQ-AHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHRLPLFVWSIFITAFLLLLS
LPVLSAGVTMLLLDRNFNTSFFEVAGGGDPVLYQHLFWFFGHPEVYILIIPGFGIISHIVSTYS-KKPVFGEVSMVYAMA
SIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLA-VPMLYAIAFLFLFTIGGLTGVA
LANASLDVAFHDTYYVVGHFHYVLSMGAIFSLFAGYYYWSPQILGLYYNEKLAQIQFWLIFV-GANVIFLPMHFLGVNGM
PRRIPDYPDAFAGWNYVASIGSIIAVFSLFLFIYILYDQLVNGLENKVNNK---------SVIYNKGPDFVESNQIFATN
KIKSSSIEFLLTSPPAVHTFNTPAVQS-------

>Arabidopsis_thaliana]
--------MKNLVR-------WL----------------------FSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELA
RPG-DQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVE
VGSGTGWTVYPPLSGIT-SHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLS
LPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPVFGYLGMVYAMI
SIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYK-TPMLFAVGFIFLFTIGGLTGIV
LANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFF-GVNLTFFPMHFLGLSGM
PRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSG-------N---------NKRCAPSPWALELN------
---STTLEWMVQSPPAFHTFGELPAIKETKSYVK

>Oryza_sativa_Indica_Group]
--------MTNLVR-------WL----------------------FSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELA
RPG-DQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVE
VGSGTGWTVYPPLSGIT-SHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLS
LPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFS-RKPVFGYLGMVYAMI
SIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYK-TPMLFAVGFIFLFTIGGLTGIV
LANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFF-GVNLTFFPMHFLGLSGM
PRRIPDYPDAYAGWNALSSFGSYISVVGIRRFFVVVAITSSSG-------K---------NKRCAESPWAVEQN------
---PTTLEWLVQSPPAFHTFGELPAIKETKS---

>Drosophila_melanogaster]
-----------SRQ-------WL----------------------FSTNHKDIGTLYFIFGAWAGMVGTSLSILIRAELG
HPG-ALI--GDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPALSLLLVSSMVE
NGAGTGWTVYPPLSAGI-AHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGISLDRMPLFVWSVVITALLLLLS
LPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGKKETFGSLGMIYAML
AIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQLSYS-PAILWALGFVFLFTVGGLTGVV
LANSSVDIILHDTYYVVAHFHYVLSMGAVFAIMAGFIHWYPLFTGLTLNNKWLKSHFIIMFI-GVNLTFFPQHFLGLAGM
PRRYSDYPDAYTTWNIVSTIGSTISLLGILFFFFIIWESLVSQ-------R---------Q------VIYPIQL------
---NSSIEWYQNTPPAEHSYSELPLLTN------

>Anopheles_gambiae]
-----------SRQ-------WL----------------------FSTNHKDIGTLYFIFGAWAGMVGTSLSILIRAELG
HPG-AFI--GDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWMLPPSLTLLISSSMVE
NGAGTGWTVYPPLSSGI-AHAGASVDLAIFSLHLAGISSILGAVNFITTVINMRSPGITLDRMPLFVWSVVITAVLLLLS
LPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIITQESGKKETFGNLGMIYAML
AIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQLTYS-PAMLWAFGFVFLFTVGGLTGVV
LANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWYPLLTGLTMNPTWLKIQFSIMFV-GVNLTFFPQHFLGLAGM
PRRYSDFPDSYLTWNVVSSLGSTISLFAILYFLFIIWESMITQ-------R---------T------PAFPMQL------
---SSSIEWYHTLPPAEHTYAELPLLTNN-----

>Homo_sapiens]
---------MFADR-------WL----------------------FSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELG
QPG-NLL--GNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVE
AGAGTGWTVYPPLAGNY-SHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLS
LPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMM
SIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWS-AAVLWALGFIFLFTVGGLTGIV
LANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFI-GVNLTFFPQHFLGLSGM
PRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASK-------R---------K------VLMVEEP------
---SMNLEWLYGCPPPYHTFEEPVYMKS------

>Pan_troglodytes]
---------MFTDR-------WL----------------------FSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELG
QPG-NLL--GNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVE
AGAGTGWTVYPPLAGNY-SHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLS
LPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMM
SIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWS-AAVLWALGFIFLFTVGGLTGIV
LANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIQFAIMFI-GVNLTFFPQHFLGLSGM
PRRYSDYPDAYTTWNVLSSVGSFISLTAVMLMIFMIWEAFASK-------R---------K------VLMVEEP------
---SANLEWLYGCPPPYHTFEEPVYMKS------

>Mus_musculus]
---------MFINR-------WL----------------------FSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELG
QPG-ALL--GDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVE
AGAGTGWTVYPPLAGNL-AHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLS
LPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMM
SIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWS-PAMLWALGFIFLFTVGGLTGIV
LSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGFTLDDTWAKAHFAIMFV-GVNMTFFPQHFLGLSGM
PRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFASK-------R---------E------VMSVSYA------
---STNLEWLHGCPPPYHTFEEPTYVKVK-----

>Rattus_norvegicus]
---------MLVNR-------WL----------------------FSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELG
QPG-ALL--GDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVE
AGAGTGWTVYPPLAGNL-AHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLS
LPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMM
SIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWS-PAMLWALGFIFLFTVGGLTGIV
LSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFSGYTLNDTWAKAHFAIMFV-GVNMTFFPQHFLGLAGM
PRRYSDYPDAYTTWNTVSSMGSFISLTAVLVMIFMIWEAFASK-------R---------E------VLSISYS------
---STNLEWLHGCPPPYHTFEEPSYVKVK-----

>Bos_taurus]
---------MFINR-------WL----------------------FSTSHKDIGTLYLLFDAWAGMVGTALSLLIRAELG
QPG-TLL--GDDQIYNAVVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVE
AGAGTGWTVYPPLAGNL-AHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVMITAVLLLLS
LPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMM
SIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWS-PAMMWALGFIFLFTVGGLTGIV
LANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFV-GVNMTFFPQHFLGLSGM
PRRYSDYPDAYTMWNTISSMGSFISLTAVMLMVFIIWEAFASK-------R---------E------VLTVDLT------
---TTNLEWLNGCPPPYHTFEEPTYVNLK-----

>Canis_lupus_familiaris]
---------MFINR-------WL----------------------FSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELG
QPG-TLL--GDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVE
AGAGTGWTVYPPLAGNL-AHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLS
LPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMM
SIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWS-PAMLWALGFIFLFTVGGLTGIV
LANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFAHWFPLFSGYTLNDTWAKIHFTIMFV-GVNMTFFPQHFLGLSGM
PRRYSDYPDAYTTWNTVSSMGSFISLTAVMLMIFMIWEAFASK-------R---------E------VAMVELT------
---TTNIEWLHGCPPPYHTFEEPTYVIQK-----

>Gallus_gallus]
--------MTFINR-------WL----------------------FSTNHKDIGTLYLIFGTWAGMAGTALSLLIRAELG
QPG-TLL--GDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVE
AGAGTGWTVYPPLAGNL-AHAGASVDLAIFH-YLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAILLLLS
LPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVAYYAGKKEPFGYMGMVWAML
SIGFLGFIVWAHHMFTVRMDVDTRAYFTSATMIIAIPTGIKVFSWLATLHGGTIKWD-PPMLWALGFIFLFTIGGLTGIV
LANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGFTLHPSWTKAHFGVMFT-GVNLTFFPQHFLGLAGM
PRRYSDYPDAYTLWNTLSSIGSLISMTAVIMLMFIVWEAFSAK-------R---------K------VLQPELT------
---ATNIEWIHGCPPPYHTFEEPAFVQVQE----

>Danio_rerio]
---------MTITR-------WF----------------------FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELS
QPG-ALL--GDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVE
AGAGTGWTVYPPLAGNL-AHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLS
LPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMM
AIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWE-TPMLWALGFIFLFTVGGLTGIV
LANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWTKIHFGVMFI-GVNLTFFPQHFLGLAGM
PRRYSDYPDAYALWNTVSSIGSLISLVAVIMFLFILWEAFTAK-------R---------E------VLSVELT------
---ATNVEWLHGCPPPYHTFEEPAFVQIQSN---